The Institute of Enzymology

Alinda Nagy

Articles

				
							1.  						
						
							Kondás K, Szláma G, Nagy A, Trexler M and Patthy L (2011) [21936825]						
						
							Biological functions of the WAP domain-containing multidomain proteins WFIKKN1 and WFIKKN2.						
					
							Biochem Soc T
							39,
							1416-20						
					
							2.  						
						
							Nagy A, Bányai L and Patthy L (2011) [-100080117]						
						
							Reassessing Domain Architecture Evolution of Metazoan Proteins: Major Impact of Errors Caused by Confusing Paralogs and Epaktologs						
					
							Genes
							2,
							516-561						
					
							3.  						
						
							Nagy A , Szláma Gy , Szarka E , Trexler M , Bányai L  and Patthy L  (2011) [-100077786]						
						
							Reassessing Domain Architecture Evolution of Metazoan Proteins: Major Impact of Gene Prediction Errors						
					
							Genes
							2,
							449-501						
					
							4.  						
						
							Nagy A  and Patthy L  (2011) [-100093015]						
						
							Reassessing Domain Architecture Evolution of Metazoan Proteins: The Contribution of Different Evolutionary Mechanisms						
					
							Genes
							2,
							578-598						
					
							5.  						
						
							Harrow J, Nagy A, Reymond A, Alioto T, Patthy L, Antonarakis SE and Guigó R (2009) [19226436]						
						
							Identifying protein-coding genes in genomic sequences.						
					
							Genome Biol
							10,
							201						
					
							6.  						
						
							Nagy A, Hegyi H, Farkas K, Tordai H, Kozma E, Bányai L and Patthy L (2008) [18752676]						
						
							Identification and correction of abnormal, incomplete and mispredicted proteins in public databases.						
					
							BMC Bioinformatics
							9,
							353						
					
							7.  						
						
							Tress ML, Martelli PL, Frankish A, Reeves GA, Wesselink JJ, Yeats C, Olason PL, Albrecht M, Hegyi H, Giorgetti A, Raimondo D, Lagarde J, Laskowski RA, López G, Sadowski MI, Watson JD, Fariselli P, Rossi I, Nagy A, Kai W, Størling Z, Orsini M, Assenov Y, Blankenburg H, Huthmacher C, Ramírez F, Schlicker A, Denoeud F, Jones P, Kerrien S, Orchard S, Antonarakis SE, Reymond A, Birney E, Brunak S, Casadio R, Guigo R, Harrow J, Hermjakob H, Jones DT, Lengauer T, Orengo CA, Patthy L, Thornton JM, Tramontano A and Valencia A (2007) [17372197]						
						
							The implications of alternative splicing in the ENCODE protein complement.						
					
							P Natl Acad Sci Usa
							104,
							5495-500						
					
							8.  						
						
							Liepinsh E, Nagy A, Trexler M, Patthy L and Otting G (2006) [16791741]						
						
							Second Kunitz-type protease inhibitor domain of the human WFIKKN1 protein.						
					
							J Biomol NMR
							35,
							73-8						
					
							9.  						
						
							Tordai H, Nagy A, Farkas K, Bányai L and Patthy L (2005) [16176277]						
						
							Modules, multidomain proteins and organismic complexity.						
					
							FEBS J
							272,
							5064-78						
					
							10.  						
						
							Nagy A, Trexler M and Patthy L (2003) [12709070]						
						
							Expression, purification and characterization of the second Kunitz-type protease inhibitor domain of the human WFIKKN protein.						
					
							Eur J Biochem
							270,
							2101-7
Books or book chapters

Nagy A, Hegyi H, Farkas K, Tordai H, Kozma E, Banyai L and Patthy L (2008)
	Quality control of gene predictions
	Modern Genome Annotation , 41-54